Bio


Research Areas:
Bioenergy, Physiology, Ecophysiology, Metabolism, Systems Biology, Food Security

Publications

PUBLICATIONS IN SCIENTIFIC JOURNALS

De Souza AP, Long SP (2018) Toward improving photosynthesis in cassava: characterizing photosynthetic limitations in four current African cultivars. Food and Energy Security: e00130. Number of citations:  None (just published).

De Souza AP, Grandis A, Arenque-Musa BC, Buckeridge MS (2018) Diurnal variation in gas exchange and non-structural carbohydrates throughout sugarcane development. Functional Plant Biology: https://doi.org/10.1071/FP17268. Number of citations: None (just published).

Tavares EPQ, Grandis A, Lembke CG, Souza GM, Purgatto E, De Souza AP, Buckeridge MS (2018) Roles of auxin and ethylene in aerenchyma formation in sugarcane roots. Plant Signaling & Behavior, https://doi.org/10.1080/15592324.2017.1422464 Number of citations:  None (just published).

Jaiswal D, De Souza AP, Larsen S, LeBauer DS, Miguez FE, Sparovek G, Bollero G, Buckeridge MS, Long SP (2017) Brazilian sugarcane ethanol as an expandable green alternative to crude oil use. Nature Climate Change 7: 788-792. Number of citations:  5.

Wang Y, Song Q, Jaiswal D, De Souza AP, Long SP, Zhu X-G (2017) Development of a three-dimensional ray-tracing model of sugarcane canopy photosynthesis and its application in assessing impacts of varied row spacing. Bioenergy Research 10 (3): 626-634. Number of citations:  2.

Leite DCC, Grandis A, Tavares EPQ, Piovezani AR, Pattathil S, Avci U, Rossini A, Cambler A, De Souza AP, Hahn MG, Buckeridge MS (2017) Cell wall changes during the formation of aerenchyma in sugarcane roots. Annals of Botany 120 (5): 693-708.  Number of citations:  4.

Ruiz-Vera UM, De Souza AP, Long SP, Ort DR (2017) The role of sink strength and nitrogen availability in the down-regulation of photosynthetic capacity in field-grown Nicotiana tabacum L. at elevated CO2 concentration. Frontiers in Plant Science 8: 998. Number of citations:  2.

De Souza AP, Massemburg LN, Jaiswwal D, Cheng S, Shekar R, Long SP (2017) Rooting for cassava: insights into photosynthesis and associated physiology as a route to improve yield potential. New Phytologist 213: 50-65. Number of citations: 8.

Navarro BV, ElBl P, De Souza AP, Jardim V, Oliveira LF, Macedo AF, dos Santos ALW, Buckeridge MS, Floh EIS (2017) Carbohydrate-mediated responses during zygotic and early somatic embryogenesis in the endangered conifer, Araucaria angustifolia. Plos One 12 (7): e0180051. Number of citations: 1.

Damasio ARL, Rubio MV, Gonçalves TA, Persinoti GF, Segato F, Prade RA, Contesini FJ, De Souza AP, Buckeridge MS, Squina FM (2017) Xyloglucan breakdown by endo-xylogucanase family from Aspergillus fumigatus. Applied Microbiology Biotechnology 101: 2893-2903. Number of citations: 3.

Oliveira DM, Salvador VH, Mota TR, Finger-Teixeira A, Almeida RF, Paixao DAA, De Souza AP, Buckeridge MS, Marchiosi R, Ferrarese-Filho O, Squina FM, dos Santos WD (2016) Feruloyl esterase from Aspergillus clavatus improves xylan hydrolysis of sugarcane bagasse. AIMS Bioengineering 4(1):1-11. Number of citations: 4.

Bazzo Martins MT, de Sousa WR,  Cunha BADB, Basso MF, Oliveira NG, Vinecky F, Martins PK, Oliveira PA, Arenque-Musa BC, De Souza AP, Buckeridge MS, Kobayashi AD, Quirino BF, Molinari HBC (2016) Characterization of sugarcane (Saccharum spp.) leaf senescence: implications for biofuel production. Biotechnology for Biofuels 9: 153. Number of citations: 3.

Lira BS, Rosado D, Almeida J, De Souza AP, Buckeridge MS, Purgatto E, Guyer L, Hörtensteiner S, Freschi L, Rossi M (2016) Pheophytinase knockdown impacts carbon metabolism and nutraceutical content under normal growth conditions in tomato. Plant and Cell Physiology 57 (3): 642-653. Number of citations: 7.

De Souza AP,  Cocuron J-C, Garcia AC, Alonso AP, Buckeridge MS (2015) Changes in whole-plant metabolism during the grain –filling stage in sorghum grown under elevated CO2 and drought. Plant Physiology 169: 1755-1765. Number of citations: 5.

Almeida J, Azevedo MS, Spicher L, Glausser G, vom Dorp, K, Guyer L, Carranza AV, Asis R, De Souza AP, Buckeridge M, Demarco D., Bres C, Rothan C, Peres LEP, Hörtensteiner S, Kessler F, Dörmann P, Carrari F, Rossi M. (2015) Down-regulation of tomato PHYTOL KINASE strongly impairs tocopherol biosynthesis and affects prenyllipid metabolism in an organ-specific manner. Journal of Experimental Botany: doi: 10.1093/jxb/erv504. Number of citations: 15.

Borin GP, Sanchez CC, De Souza AP, Santana ES, Souza AT, Leme AFP, Squina FM, Buckeridge M, Goldman GH, Oliveira JVC (2015) Comparative secretome analysis of Trichoderma reesei and Aspergillus niger during growth on sugarcane biomass. Plos One 10 (6): e0129275. Number of citations: 39.

Tavares EQP, De Souza AP, Buckeridge MS (2015) How endogenous plant cell-wall degradation mechanisms can help achieve higher efficiency in saccharification of biomass. Journal of Experimental Botany: doi:10.1093/jxb/erv171. Number of citations: 16.

 De Souza AP, Kamei CLA, Torres AF, Pattathil S, Hahn MG, Trindade LM, Buckeridge MS (2015) How cell wall complexity influences saccharification efficiency in Miscanthus sinensis. Journal of Experimental Botany: doi:10.1093/jxb/erv183. Number of citations: 35.

Mendes de Rezende, F, De Souza, AP, Buckeridge, MS & Furlan, CM (2015) Is guava phenolic metabolism influenced by elevated atmospheric CO2? Environmental Pollution 196:483-488. Number of citations: 8.

Arenque BC, Grandis A, Pocius O, De Souza AP & Buckeridge MS (2014) Responses of Senna reticulata, a legume tree from the Amazonian floodplains, to elevated atmospheric CO2 concentration and waterlogging. Trees Structure and Function 28: 1021-1034. Number of citations: 14.

Buckeridge MS & De Souza AP (2014) Breaking the “glycomic code” of cell wall polysaccharides may improve second-generation bioenergy production from biomass Bioenergy Research 7: 1065 – 1073. Number of citations: 25.

De Souza AP, Grandis A, Leite DCC & Buckeridge MS (2014) Sugarcane as a Bioenergy Source: History, Performance, and Perspectives for Second- Generation Bioethanol Bioenergy Research 7: 24-35. Number of citations: 53.

De Godoy F, Bermudez L, Lira BS, De Souza AP, Elbl P, Demarco D, Alseekh S, Insani M, Buckeridge M, Almeida J, Grigioni G, Fernie A, Carrari F & Rossi M (2013) Galacturonosyltransferase 4 silencing alters pectin composition and carbon partitioning in tomato Journal of Experimental Botany (On-line) 106: 1-18. Number of citations: 14.

De Souza AP, Leite DCC, Pathatil S, Hanh MG & Buckeridge MS (2013) Composition and structure of sugarcane cell wall polysaccharides: Implications for second-generation bioethanol production Bioenergy Research 6: 564-579. Number of citations: 122.

De Souza AP, Arundale RA, Dohleman, FG, Long SP & Buckeridge MS (2013) Will the exceptional productivity of Miscanthus x giganteus increase further under rising atmospheric CO2? Agricultural and Forest Meteorology 171-172: 82-92. Number of citations: 35.

Buckeridge MS, De Souza AP, Arundale RA, Anderson-Teixeira K & DeLucia E (2012) Ethanol from Sugarcane in Brazil: A “Midway” Strategy for Increasing Ethanol Production while Maximizing Environmental Benefits Global Change Biology and Bioenergy 4: 119-126. Number of citations: 49.

Hotta CT, Lembke CG, Domingues DS, Ochoa EA, Cruz GMQ, Melotto-Passarin DM,  Marconi  TG, Santos, MO, Mollinari M, Margarido GRA, Crivellari AC,  Santos WD, De Souza AP, Hoshino, AA, Carrer H, Souza  AP,  Garcia AAF, Buckeridge MS, Menossi  M, Sluys, M-A & Souza GM (2010) The Biotechnology Roadmap for Sugarcane Improvement Tropical Plant Biology: 75-87. Number of citations: 60.

De Souza AP, Gaspar M, da Silva EA, Waclawovsky AJ, Ulian EC, Nishiyama Jr MY, dos Santos RV, Teixeira, MM, Souza GM & Buckeridge MS (2008) Elevated CO2 increases photosynthesis, biomass and productivity, and modifies gene expression in sugarcane. Plant, Cell and Environment 31: 1116-1127. Number of citations: 146.

BOOK CHAPTERS

 Buckeridge MS, De Souza AP, Tavares EQP, Cambler AB (2017) Sugarcane cell wall structure and degradation: from monossacharide analyzes to the glycomic code. In: Buckeridge, MS & De Souza, AP (eds). Advances of basic science for second generation bioethanol from sugarcane. Springer, NY. pg. 7-19. Number of citations: None.

Buckeridge MS, De Souza AP (2017) Routes to second-generation bioethanol in Brazil: foundation of the National Institute of Science and Technology of Bioethanol. In: Buckeridge, MS & De Souza, AP (eds). Advances of basic science for second generation bioethanol from sugarcane. Springer, NY. pg. 1-4. Number of citations: None.

De Souza AP, Arenque BC, Tavares EQP & Buckeridge MS (2016) Transcriptomics and genetics associated with plant responses to elevated CO2 atmospheric concentrations In: Edwards D & Batley J (Eds) Plant Genomics and Climate Change. Springer, New York, pp.67-83. Number of citations: None.

Buckeridge MS, dos Santos WD, Tiné MAS, De Souza AP (2016) The cell wall architecture of sugarcane and its implications to cell wall recalcitrance. In: Lam E, Carrer H, da Silva JA, Kole C (Eds) Compendium of bioenergy plants: SUGARCANE. CRC Press – Taylor and Francis Group, pp.31-50. Number of citations: 13.

Grandis A, De Souza, AP, Tavares, EQP & Buckeridge, MS (2014) Using Natural Plant Cell Wall Degradation Mechanisms to Improve Second Generation Bioethanol In: McCann, M, Buckeridge, MS & Carpita, NC (eds) Plants & Bioenergy, Springer, New York, pp  211-230. Number of citations: 8.

Contributing author of Chapter 27 – Central and South America, Working Group II (WGII) (2014) Fifth Assessment Report (AR5) – Intergovernmental Panel on Climate Change

De Souza AP & Buckeridge MS (2010) Photosynthesis in sugarcane an its strategic importance to face the global climatic change In: Luis A B Cortez (Org) SUGARCANE BIOETHANOL: R&D for productivity and sustainability: Blucher. Number of citations: 3.

Buckeridge MS, dos Santos WD & De Souza AP (2010) Routes for Cellulosic Ethanol in Brazil In: Luis A B Cortez (Org) SUGARCANE BIOETHANOL: R&D for productivity and sustainability: Blucher. Number of citations: 37.

De Souza  AP,  Gaspar M,  Tiné MA & Buckeridge MS (2008)  Ajustando os botões: como as plantas lidam com o aumento do CO2? In: Marcos Silveira Buckeridge (Org) Biologia & Mudanças Climáticas no Brasil 1 ed São Carlos: RIMA editor. Number of citations: None.

OTHER PUBLICATIONS

da Silva FC, Diaz-Ambrona CGH, Buckeridge MS, De Souza AP, Barbieri V,  Dourado Neto D (2008) Sugarcane and Climate Change: effects of CO2 on potential growth and development. Proceedings of the IV###sup/sup### International Symposium on Applications of modeling as an innovative technology in the agri-food-chain. Acta Horticulturae 802: 331-336. Number of citations: 7.

Sousa SM, De Souza AP (2011) Efeito do aumento de CO2 e de estresses abióticos em milho e sorgo. Technical report Documentos EMBRAPA Milho e Sorgo. 30p. Number of citations: None.

PATENTS

Método para determinação da capacidade de uma planta acumular açúcar e para alterar a capacidade de uma planta acumular açúcar – (PI 0719295-9). Date: August 22 2017.  Inventors: Gláucia Mendes Souza, Flávia Stal Papini-Terzi, Flávia Riso Rocha, Alessandro Jaquiel Waclawovsky, Ricardo Zorzetto Nicollielo Vêncio, Josélia Oliveira Marques, Juliana de Maria Felix, Marcelo Menossi Teixeira, Marcos Buckeridge, Amanda Pereira de Souza, Eugênio César Ulian

Genes associated to sucrose content - (US 7,732,664 B2). Date: Jun 08 2010. Inventors: Gláucia Mendes Souza, Flávia Stal Papini-Terzi, Flávia Riso Rocha, Alessandro Jaquiel Waclawovsky, Ricardo Zorzetto Nicollielo Vêncio, Josélia Oliveira Marques, Juliana de Maria Felix, Marcelo Menossi Teixeira, Marcos Buckeridge, Amanda Pereira de Souza, Eugênio César Ulian

BOOK EDITING

Buckeridge MS & De Souza AP (2017) Advances of basic science for second generation bioethanol from sugarcane. Springer, NY. 219p.

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